Table 2 Bayesian approach result for Replicate 54
From: Linkage analysis of the simulated data – evaluations and comparisons of methods
Model | Marginalc | Joint | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
No. | Freq.a | Penetrancesb |
|
|
|
|
|
| ||
1 | 0.2 | 0.05 | 0.50 | 0.70 | 1.00 | 42.2 | 0.92 | 38.5 | 0.92 | 46.3 |
2 | 0.1 | 0.10 | 0.50 | 0.70 | 1.00 | 42.3 | 0.85 | 37.8 | 0.90 | 46.4 |
3 | 0.2 | 0.00 | 0.20 | 0.50 | 1.00 | 42.4 | 0.89 | 39.2 | 0.92 | 48.3 |
4 | 0.2 | 0.00 | 0.50 | 0.60 | 1.00 | 41.7 | 0.85 | 36.9 | 0.92 | 45.4 |
5 | 0.2 | 0.00 | 0.35 | 0.55 | 1.00 | 41.8 | 0.81 | 38.2 | 0.92 | 46.3 |
6 | 0.3 | 0.00 | 0.60 | 1.00 | 1.00 | 42.9 | 0.51 | 30.7 | 0.98 | 45.6 |
7 | 0.3 | 0.00 | 0.20 | 0.60 | 1.00 | 42.6 | 0.96 | 39.7 | 0.93 | 48.6 |
8 | 0.3 | 0.00 | 0.40 | 0.80 | 1.00 | 42.4 | 0.95 | 39.2 | 0.95 | 48.2 |
-
aFreq., P(D), where D is disease allele. bPenetrances are for genotypes dd, Dd, DD, in that order. c
and 
represent the estimated posterior probability of linkage and the corresponding position of the disease gene for the marginal analysis. Similar notations for joint analysis are used.