Your privacy, your choice

We use essential cookies to make sure the site can function. We also use optional cookies for advertising, personalisation of content, usage analysis, and social media.

By accepting optional cookies, you consent to the processing of your personal data - including transfers to third parties. Some third parties are outside of the European Economic Area, with varying standards of data protection.

See our privacy policy for more information on the use of your personal data.

for further information and to change your choices.
Skip to main content

Table 4 Summary of linkage results for ALDX1

From: A genome-wide linkage analysis of alcoholism on microsatellite and single-nucleotide polymorphism data, using alcohol dependence phenotypes and electroencephalogram measures

  

Affymetrix SNPs

Illumina SNPs

Microsatellites

Comb3

Chr

Location (cM)

LOD (p)

IC/Chr

LOD (p)

IC/Chr

LOD (p)

IC/Chr

LOD (p)

IC/Chr

1

(138–148)

1.060 (0.014)

0.942 (0.02)

1.330 (0.007)

0.932 (0.02)

 

0.832 (0.07)

0.950 (0.020)

0.972 (0.01)

2

(10–30)

1.140 (0.011)

0.948(0.02)

1.740 (0.002)

0.934 (0.02)

1.51 (0.004)

0.845 (0.08)

1.440 (0.005)

0.975 (0.01)

 

(114–125)

1.100 (0.012)

 

0.700 (0.040)

   

1.080 (0.013)

 
 

(134–147)

1.100 (0.012)

 

1.540 (0.004)

   

1.180 (0.010)

 
 

(228–252)

1.720 (0.002)

     

1.660 (0.003)

 

6

(20–24)

0.810 (0.030)

0.947 (0.02)

0.660 (0.040)

0.935 (0.02)

 

0.803 (0.09)

0.940 (0.020)

0.974 (0.01)

 

(183–190)

  

2.150 (0.0008)

   

1.910 (0.002)

 

7

(3–19)

1.350 (0.006)

0.944 (0.03)

2.3200 (0.0005)

0.933 (0.02)

0.69 (0.04)

0.898 (0.05)

1.720 (0.002)

0.976 (0.01)

 

(29–37)

1.170 (0.010)

 

0.760 (0.030)

   

1.060 (0.014)

 
 

(54–62)

0.980 (0.020)

 

0.740 (0.030)

 

1.22 (0.009)

 

1.230 (0.009)

 
 

(83–119)

2.2500 (0.0006)

 

1.97 (0.0013)

 

1.72 (0.002)

 

2.5200 (0.0003)

 

9

(141–142)

0.660 (0.040)

0.947 (0.02)

0.690 (0.040)

0.926 (0.02)

 

0.782 (0.10)

0.770 (0.030)

0.974 (0.01)

10

(122–128)

0.750 (0.030)

0.943 (0.02)

0.650 (0.040)

0.924 (0.03)

 

0.664 (0.08)

 

0.967 (0.01)

 

(149–179)

1.9900 (0.0012)

 

1.750 (0.002)

 

0.94 (0.02)

 

1.770 (0.002)

 

11

(117–130)

1.280 (0.008)

0.946 (0.02)

1.030 (0.015)

0.924 (0.02)

1.39 (0.006)

0.709 (0.07)

1.450 (0.005)

0.968(0.01)

12

(0–5)

1.150 (0.011)

0.944 (0.02)

 

0.929 (0.03)

 

0.816 (0.08)

 

0.974 (0.01)

 

(121–125)

0.830 (0.030)

 

0.78 (0.03)

   

0.800 (0.030)

 
 

(167–172)

0.700 (0.040)

 

0.930 (0.020)

     

13

(81–102)

1.550 (0.004)

0.945 (0.02)

1.220 (0.009)

0.931 (0.02)

 

0.802 (0.10)

1.460 (0.005)

0.972 (0.01)

17

(34–36)

 

0.922 (0.05)

 

0.914 (0.03)

1.110 (0.012)

0.694 (0.08)

0.750 (0.030)

0.961 (0.02)

 

(121–123)

  

0.800 (0.030)

     

18

(93–107)

0.960 (0.020)

0.940 (0.02)

0.720 (0.030)

0.918 (0.04)

 

0.548 (0.06)

0.910 (0.020)

0.959 (0.02)

X

(30–46)

2.0500 (0.0011)

0.915 (0.03)

1.520 (0.004)

0.902 (0.08)

 

0.744 (0.17)

1.460 (0.005)

0.947 (0.03)

  1. Summary of maximum LOD scores and the corresponding p-values (<0.05) for linkage regions for alcohol dependence phenotype ALDX1. Results are shown for microsatellites, Affymetrix SNPs, Illumina SNPs and the combined data (Comb3). The mean and standard deviation of IC are given for each chromosome. Bold text indicate the most significant region on chromosome 7.
Back to article page

BMC Genomic Data

ISSN: 2730-6844

Contact us