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Table 1 The SNPs showing significant association located in major schizophrenia susceptibility candidate regions

From: Whole-genome association studies of alcoholism with loci linked to schizophrenia susceptibility

Chr

SNP ID

Gene symbol

Cytoband

PDT p-value

Reported schizophrenia regione

1

rs908857

DUSP10

1q41

0.0043a

1q32.2-q41

 

rs1053074-rs10594

KCNJ10

1q22-q23

0.0055c

1q21-22

 

tsc1457991-tsc1254625

PBX1

1q23

0.001c

1q22-23

5

rs1229708

SPOCK

5q31

0.009a

5q31

 

tsc0935735

FER

5q21

0.0088b

5q21-31

6

rs1498426

CDKAL1

6p22.3

0.006b

6p22-24

 

rs1022092

SLC16A10

6q21-q22

0.0039b

 
 

tsc0046065

PREP

6q22

0.0022a

6q21-q22.3

 

tsc0615608

AIM1

6q21

0.0087c

 
 

tsc0253130

TCBA1

6q21

0.0003b

(0.009)d

 

8

tsc0149489-tsc0514918-tsc0529734

PTK2B

8p21.1

0.0056c

8p21-22

 

rs898249-rs900267-rs310319

BIN3

8p21.3

0.0053c

 

10

rs729245

CACNB2

10p12

0.0009a

10p11-15

  1. aAverage-PDT p-value
  2. bSum-PDT p-value
  3. cGenotype-PDT p-value
  4. dGEE p-value
  5. eData were brought from Michael et al.'s review article [2]. SNPs listed are located in genetic regions and showed allelic or genotypic association at 1% significance level. The schizophrenia susceptibility regions were identified by several independent linkage studies.
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BMC Genomic Data

ISSN: 2730-6844

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