Fig. 7

Hallmark gene analysis for DEGs. DEGs from all contrasts of infected D2-Mx1r/r at day 3 and 5 p.i. versus mock-treated D2-Mx1r/r and from all contrasts of infected B6-Mx1r/r at day 3 and 5 p.i. versus mock-treated B6-Mx1r/r mice were combined (Supplement Table S8) and subjected to hallmark gene analysis. Heatmaps show normalized expression levels (scaled by row) of the means of gene expression levels for B6-Mx1r/r and D2-Mx1r/r mice minus the respective controls. A Heatmap for hallmark ‘Inflammatory Response’ genes. B Heatmap for the hallmark ‘Interferon Alpha’ genes. C Heatmap for hallmark ‘Complement’ genes. Values were scaled by row