Quantifying variations associated with dental caries reveals disparity in effect allele frequencies across diverse populations

Table 1 Final variations included for the downstream analysis with mean allele frequencies

Variation ID	Chr	Position	dbSNP	REF Allele	ALT Allele	Minor Allele	Gene(s)	Mean Allele Freq
rs10495332	chr1	232,620,280	rs10495332	T	C	C	SIPA1L2	0.4449
rs1079204	chr2	218,265,791	rs1079204	G	A	A	AAMP	0.1291
rs121908120	chr2	218,890,289	rs121908120	T	A	A	WNT10A	0.0329
rs4016429	chr3	28,923,310	rs4016429	C	G	G	RBMS3	0.4491
rs9311745	chr3	60,016,099	rs9311745	T	C	C	FHIT	0.8257
rs17236529	chr3	160,508,519	rs17236529	C	T	T	KPNA4	0.047
rs185566659	chr3	193,676,936	rs185566659	G	A	A	OPA1	0.1132
rs6818964	chr4	73,104,747	rs6818964	C	T	T	ANKRD17	0.1252
rs9471075	chr6	39,339,256	rs9471075	A	C	C	KIF6	0.5605
rs197480	chr6	142,749,368	rs197480	C	T	T	HIVEP2,ADGRG6	0.0466
rs3798305	chr6	166,949,985	rs3798305	C	T	T	RNASET2	0.2531
rs6953213	chr7	7,273,854	rs6953213	G	A	A	COL28A1,C1GALT1	0.3604
rs215738	chr7	32,404,823	rs215738	G	A	G	PDE1C	0.41747
rs16882396	chr7	141,188,521	rs16882396	C	G	G	TMEM178B	0.2252
rs17128007	chr8	19,225,642	rs17128007	C	T	T	SH2D4A	0.1474
rs16867579	chr8	101,363,039	rs16867579	A	C	C	NACA4P	0.5031
rs10958998	chr9	10,275,798	rs10958998	A	G	G	PTPRD	0.5043
rs149467613	chr11	73,232,438	rs149467613	G	A	A	P2RY2	0.1135
rs16954776	chr13	98,048,363	rs16954776	A	G	G	IPO5,FARP1	0.5054
rs2877649	chr14	24,484,796	rs2877649	T	C	T	CMA1,SDR39U1	0.4243
rs1064524	chr16	30,481,502	rs1064524	C	T	T	ITGAL	0.0641
rs17088439	chr18	73,854,856	rs17088439	T	G	G	-	0.5764
rs6120141	chr20	33,180,849	rs6120141	T	C	C	BPIFA2	0.628
rs17124372	chr20	33,210,631	rs17124372	T	C	C	BPIFA3,BPIFA4P	0.2844

ISSN: 2730-6844