Table 1 Characterization of POD genes in P. bretschneideri
Gene name | Gene ID | Number of amino acids | MW (kDa) | pI | Aliphatic index | GRAVY |
|---|---|---|---|---|---|---|
PbPOD1 | Pbr032785.1 | 301 | 32.91 | 8.13 | 83.95 | -0.104 |
PbPOD2 | Pbr035186.1 | 325 | 35.27 | 8.82 | 84 | -0.092 |
PbPOD3 | Pbr040489.1 | 331 | 36.41 | 9.33 | 84.59 | -0.224 |
PbPOD4 | Pbr023311.1 | 284 | 31.612 | 9.04 | 86.55 | -0.349 |
PbPOD5 | Pbr003171.1 | 103 | 11.18 | 7.85 | 82.52 | -0.212 |
PbPOD6 | Pbr022808.1 | 314 | 34.17 | 5.61 | 76.82 | -0.078 |
PbPOD7 | Pbr022809.1 | 95 | 10.49 | 7.78 | 107.79 | 0.037 |
PbPOD8 | Pbr021747.1 | 354 | Undefined | Undefined | 83.76 | -0.012 |
PbPOD9 | Pbr000686.1 | 332 | 35.77 | 8.36 | 90.84 | 0.075 |
PbPOD10 | Pbr000687.1 | 324 | 34.72 | 4.48 | 79.48 | -0.207 |
PbPOD11 | Pbr000689.1 | 350 | 37.45 | 4.29 | 87.29 | -0.009 |
PbPOD12 | Pbr000691.1 | 350 | 37.09 | 4.48 | 85.06 | 0.026 |
PbPOD13 | Pbr013214.1 | 341 | 37.35 | 4.81 | 93.75 | 0.048 |
PbPOD14 | Pbr013078.1 | 319 | 34.39 | 6.23 | 90.22 | 0.124 |
PbPOD15 | Pbr013077.1 | 330 | 35.89 | 6.59 | 84.58 | -0.205 |
PbPOD16 | Pbr013075.1 | 327 | 35.04 | 9.29 | 80.55 | -0.181 |
PbPOD17 | Pbr033934.1 | 352 | 38.48 | 5.62 | 75.43 | -0.394 |
PbPOD18 | Pbr003832.1 | 332 | 35.67 | 6.88 | 79.1 | -0.077 |
PbPOD19 | Pbr006566.1 | 153 | 16.92 | 9.47 | 94.25 | -0.073 |
PbPOD20 | Pbr032800.1 | 341 | 38.51 | 8.93 | 80.88 | -0.31 |
PbPOD21 | Pbr041097.1 | 405 | 44.47 | 6.03 | 75.11 | -0.303 |
PbPOD22 | Pbr002505.1 | 352 | 39.18 | 5.91 | 85.88 | -0.298 |
PbPOD23 | Pbr002542.1 | 346 | 38.60 | 9.05 | 95.81 | -0.089 |
PbPOD24 | Pbr000438.1 | 391 | 42.97 | 9.22 | 81.61 | -0.198 |
PbPOD25 | Pbr000146.1 | 341 | 38.74 | 8.3 | 78.89 | -0.436 |
PbPOD26 | Pbr014180.2 | 215 | 23.39 | 5.11 | 70.84 | -0.405 |
PbPOD27 | Pbr013845.1 | 868 | 98.12 | 6.33 | 80.16 | -0.539 |
PbPOD28 | Pbr010973.1 | 318 | 34.61 | 9.43 | 89.31 | -0.112 |
PbPOD29 | Pbr010975.1 | 329 | 35.67 | 9.65 | 78.02 | -0.265 |
PbPOD30 | Pbr010976.1 | 142 | 16.18 | 8.44 | 53.59 | -1.001 |
PbPOD31 | Pbr010977.1 | 161 | 18.18 | 9.11 | 68.39 | -0.572 |
PbPOD32 | Pbr002947.1 | 109 | 12.01 | 5.34 | 75.96 | -0.144 |
PbPOD33 | Pbr002948.1 | 471 | 51.55 | 8.99 | 70.04 | -0.404 |
PbPOD34 | Pbr002950.1 | 318 | 34.58 | 9.31 | 89.31 | -0.111 |
PbPOD35 | Pbr002956.1 | 329 | 35.81 | 9.73 | 77.72 | -0.259 |
PbPOD36 | Pbr002957.1 | 83 | 90.17 | 6.54 | 80.96 | -0.135 |
PbPOD37 | Pbr013905.1 | 336 | 37.24 | 8.72 | 84.17 | -0.121 |
PbPOD38 | Pbr040033.1 | 328 | 35.55 | 9.02 | 80 | -0.156 |
PbPOD39 | Pbr026505.1 | 331 | 35.93 | 8.79 | 85.74 | -0.073 |
PbPOD40 | Pbr026504.1 | 331 | 36.04 | 8.89 | 83.96 | -0.067 |
PbPOD41 | Pbr026503.1 | 331 | 36.04 | 8.62 | 84.26 | -0.051 |
PbPOD42 | Pbr026502.1 | 327 | 35.58 | 8.57 | 86.18 | -0.108 |
PbPOD43 | Pbr004299.1 | 310 | 33.40 | 4.82 | 92.84 | 0.168 |
PbPOD44 | Pbr020588.1 | 323 | 34.41 | 5.88 | 92.17 | 0.062 |
PbPOD45 | Pbr020590.1 | 323 | 34.41 | 5.88 | 92.17 | 0.062 |
PbPOD46 | Pbr006117.1 | 321 | 34.70 | 8.11 | 90.22 | -0.002 |
PbPOD47 | Pbr006119.1 | 321 | 34.72 | 8.41 | 90.22 | -0.012 |
PbPOD48 | Pbr036549.1 | 337 | 36.12 | 5.44 | 81.39 | 0.009 |
PbPOD49 | Pbr036474.1 | 323 | 34.75 | 5.32 | 83.96 | -0.036 |
PbPOD50 | Pbr005400.1 | 318 | 34.37 | 8.71 | 81.73 | -0.007 |
PbPOD51 | Pbr008699.1 | 450 | 49.35 | 5.63 | 74.29 | -0.259 |
PbPOD52 | Pbr018082.1 | 327 | 35.48 | 9.08 | 82.91 | -0.127 |
PbPOD53 | Pbr018080.1 | 326 | 35.60 | 9.01 | 89.79 | -0.097 |
PbPOD54 | Pbr026235.1 | 327 | 35.94 | 8.58 | 80.61 | -0.082 |
PbPOD55 | Pbr010213.1 | 356 | 39.61 | 5.44 | 84.63 | -0.284 |
PbPOD56 | Pbr010258.1 | 498 | 56.14 | 8.2 | 89.28 | -0.307 |
PbPOD57 | Pbr010270.1 | 346 | 38.62 | 9.26 | 95.26 | -0.105 |
PbPOD58 | Pbr031894.1 | 336 | 38.34 | 8.3 | 80.95 | -0.428 |
PbPOD59 | Pbr020734.1 | 262 | 28.68 | 6.51 | 75.27 | -0.494 |
PbPOD60 | Pbr020725.1 | 262 | 28.68 | 6.51 | 75.27 | -0.494 |
PbPOD61 | Pbr027164.1 | 350 | 38.06 | 5.2 | 84.14 | -0.195 |
PbPOD62 | Pbr022326.1 | 301 | 32.77 | 7.54 | 72.36 | -0.209 |
PbPOD63 | Pbr003310.1 | 247 | 26.54 | 4.38 | 71.09 | -0.45 |
PbPOD64 | Pbr003309.1 | 324 | 34.78 | 4.57 | 77.93 | -0.226 |
PbPOD65 | Pbr003308.1 | 332 | 35.71 | 7.53 | 88.49 | -0.032 |
PbPOD66 | Pbr011557.1 | 1314 | 14.34 | 5.78 | 92.38 | -0.245 |
PbPOD67 | Pbr011559.1 | 320 | 34.90 | 8.97 | 90.25 | -0.033 |
PbPOD68 | Pbr011560.1 | 322 | 35.08 | 9.47 | 87.3 | -0.212 |
PbPOD69 | Pbr011562.1 | 314 | 33.54 | 9.35 | 78.57 | -0.22 |
PbPOD70 | Pbr026058.1 | 311 | 33.75 | 8.09 | 77.2 | -0.261 |
PbPOD71 | Pbr014607.1 | 308 | 32.69 | 8.91 | 85.29 | -0.026 |
PbPOD72 | Pbr014605.1 | 249 | 26.22 | 8.94 | 78.03 | -0.226 |
PbPOD73 | Pbr008320.1 | 156 | 17.36 | 5.82 | 76.35 | -0.599 |
PbPOD74 | Pbr008291.1 | 250 | 27.63 | 5.3 | 81.6 | -0.398 |
PbPOD75 | Pbr035815.1 | 338 | 35.70 | 5.1 | 82.57 | -0.096 |
PbPOD76 | Pbr035513.1 | 160 | 17.77 | 8.75 | 102.31 | 0.144 |
PbPOD77 | Pbr039193.1 | 228 | 25.11 | 8.93 | 84.78 | -0.167 |
PbPOD78 | Pbr030045.1 | 338 | 36.94 | 4.81 | 96.6 | 0.038 |
PbPOD79 | Pbr015016.1 | 333 | 35.74 | 4.42 | 88.77 | -0.022 |
PbPOD80 | Pbr015032.1 | 324 | 35.05 | 5.49 | 91.82 | 0.095 |
PbPOD81 | Pbr014793.1 | 331 | 36.10 | 7.03 | 93.66 | -0.049 |
PbPOD82 | Pbr034800.1 | 318 | 34.33 | 9.37 | 82.23 | -0.107 |
PbPOD83 | Pbr034821.1 | 573 | 63.18 | 6.96 | 91.8 | -0.239 |
PbPOD84 | Pbr016853.1 | 277 | 29.54 | 6.41 | 81.7 | -0.129 |
PbPOD85 | Pbr002672.1 | 327 | 36.55 | 9.52 | 82.97 | -0.242 |
PbPOD86 | Pbr005912.1 | 864 | 93.87 | 7.87 | 92.95 | -0.177 |
PbPOD87 | Pbr009308.1 | 327 | 36.55 | 9.52 | 82.97 | -0.242 |
PbPOD88 | Pbr027845.1 | 330 | 35.36 | 5.4 | 77.52 | -0.186 |
PbPOD89 | Pbr010632.1 | 320 | 34.69 | 7.53 | 86.84 | -0.096 |
PbPOD90 | Pbr007872.1 | 339 | 37.26 | 5.36 | 78.82 | -0.219 |
PbPOD91 | Pbr036152.1 | 340 | 37.56 | 8.28 | 90.38 | -0.144 |
PbPOD92 | Pbr036153.1 | 336 | 36.76 | 8.03 | 89.7 | -0.04 |
PbPOD93 | Pbr011189.1 | 446 | 49.29 | 9.1 | 87.83 | -0.15 |
PbPOD94 | Pbr006005.1 | 311 | 33.75 | 8.09 | 77.2 | -0.261 |
PbPOD95 | Pbr026772.1 | 324 | 35.05 | 5.49 | 91.82 | 0.095 |
PbPOD96 | Pbr034488.2 | 325 | 35.46 | 8.78 | 87.38 | -0.124 |
PbPOD97 | Pbr034480.1 | 326 | 35.43 | 9.01 | 88.31 | -0.13 |
PbPOD98 | Pbr034479.1 | 199 | 21.63 | 9.41 | 77.99 | -0.293 |
PbPOD99 | Pbr041827.1 | 326 | 35.73 | 8.82 | 77.24 | -0.186 |
PbPOD100 | Pbr007903.1 | 350 | 38.10 | 5.2 | 84.97 | -0.181 |
PbPOD101 | Pbr007908.1 | 325 | 35.82 | 6 | 82.34 | -0.131 |
PbPOD102 | Pbr007909.1 | 325 | 36.03 | 8.33 | 81.42 | -0.14 |
PbPOD103 | Pbr037526.1 | 329 | 36.38 | 5.91 | 85.35 | -0.137 |
PbPOD104 | Pbr015968.1 | 344 | 37.91 | 5.25 | 94.97 | 0.178 |
PbPOD105 | Pbr006343.1 | 291 | 32.30 | 5.06 | 82.41 | -0.153 |
PbPOD106 | Pbr037665.1 | 295 | 31.95 | 7.53 | 83.36 | -0.151 |
PbPOD107 | Pbr037664.1 | 295 | 31.95 | 7.53 | 83.36 | -0.151 |
PbPOD108 | Pbr015965.1 | 291 | 31.04 | 7.55 | 84.16 | -0.105 |
PbPOD109 | Pb015969.1 | 109 | 11.82 | 5.1 | 82.2 | 0.205 |
PbPOD110 | Pbr027137.1 | 414 | 45.08 | 7.71 | 78.31 | -0.442 |
PbPOD111 | Pbr027136.1 | 435 | 47.43 | 7.7 | 79.01 | -0.441 |
PbPOD112 | Pbr000988.3 | 255 | 27.80 | 5.82 | 74.71 | -0.391 |
PbPOD113 | Pbr019188.1 | 878 | 97.91 | 5.85 | 71.09 | -0.647 |