Fig. 5
From: Comparative chloroplast genomics and phylogenetic analysis of Oreomecon nudicaulis (Papaveraceae)
The comparison of Small Single-Copy (SSC), Large Single-Copy (LSC), Inverted Repeat B (IRB), and IRB boundary regions in the chloroplast genomes of Meconopsis henrici (MN488591), Meconopsis horridula (MK533646), Meconopsis integrifolia (MK533647), Meconopsis racemosa (MK533649), O. nudicaulis (MW151698), Papaver dubium (NC_065205), Papaver orientale (NC_037832), Papaver pseudo-orientale (NC_065210), Papaver rhoeas (NC_037831), Papaver somniferum (NC_029434) was conducted. Comparative analysis of junction sites in chloroplast genomes was also performed. The coordinate position of the start or end of each gene from the corresponding junction is shown with arrows. All the genes that integrate from one region of the chloroplast genome to another region are shown with the T bar above or below, indicating the length of base pairs for which the integration of genes has occurred. The junction sites between each corresponding two regions on the genome are denoted as JLA (IRa/LSC), JLB (IRb/LSC), JSA (SSC/IRa), and JSB (IRb/SSC).