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Table 1 Overview of data files/data sets

From: A highly contiguous genome sequence of Alternaria porri isolate Apn-Nashik causing purple blotch disease in onion

Label

Name of the data files/data sets

File types

Data repository and identifiers

Data file 1

Detailed methodology

Microsoft word (.doc)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26207534 [16]

Data file 2

Characterization of A. porri isolate Apn Nashik

Microsoft word (.doc)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26212271 [17]

Data file 3

Onion plant infected with A. porri Apn-Nashik

Microsoft word (.doc)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213117 [18]

Data file 4

Read and Assembly statistics of A. porri Apn-Nashik

Microsoft word (.doc)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213180 [19]

Data file 5

BUSCO dothideomycetes completeness statistics

Microsoft word (.doc)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213216 [20]

Data file 6

Statistics on Genome Repeat masking

Microsoft word (.doc)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213237 [21]

Data set 1

Predicted genes of A. porri using AUGUSTUS

General feature format (.gff)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.24906318.v1 [22]

Data file 7

Summary of protein coding genes

Microsoft word (.doc)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213297 [23]

Data file 8

Functional annotation from GO and KEGG databases

Spreadsheet (.xlsx)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213552 [24]

Data file 9

Genes encoding pathogenicity related factors derived from PHI database

Spreadsheet (.xlsx)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213564 [25]

Data set 2

Annotated genes of A. porri using dbCAN2 program

Text format (.text)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.24906378.v1 [26]

Data file 10

Genes encoding Cazymes

Spreadsheet (.xlsx)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213570 [27]

Data file 11

Genome comparison of A. porri Apn Nashik with other Alternaria species

Microsoft word (.doc)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213636 [28]

Data file 12

Clusters of orthologous genes shared and unique among the Alternaria spp

Microsoft word (.doc)

https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213702 [29]

Data set 3

Sequencing reads of A. porri genomic DNA

Fastq file (.fq.gz)

NCBI SRA ID: SRX26191501

https://identifiers.org/ncbi/insdc.sra:SRX26191501[30]

Data set 4

Genomic assembly of A. porri

Fasta file

NCBI Genbank database: JAPZQB000000000.1

https://identifiers.org/nucleotide:JAPZQB000000000.1 [31]