Label | Name of the data files/data sets | File types | Data repository and identifiers |
---|---|---|---|
Data file 1 | Detailed methodology | Microsoft word (.doc) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26207534 [16] |
Data file 2 | Characterization of A. porri isolate Apn Nashik | Microsoft word (.doc) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26212271 [17] |
Data file 3 | Onion plant infected with A. porri Apn-Nashik | Microsoft word (.doc) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213117 [18] |
Data file 4 | Read and Assembly statistics of A. porri Apn-Nashik | Microsoft word (.doc) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213180 [19] |
Data file 5 | BUSCO dothideomycetes completeness statistics | Microsoft word (.doc) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213216 [20] |
Data file 6 | Statistics on Genome Repeat masking | Microsoft word (.doc) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213237 [21] |
Data set 1 | Predicted genes of A. porri using AUGUSTUS | General feature format (.gff) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.24906318.v1 [22] |
Data file 7 | Summary of protein coding genes | Microsoft word (.doc) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213297 [23] |
Data file 8 | Functional annotation from GO and KEGG databases | Spreadsheet (.xlsx) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213552 [24] |
Data file 9 | Genes encoding pathogenicity related factors derived from PHI database | Spreadsheet (.xlsx) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213564 [25] |
Data set 2 | Annotated genes of A. porri using dbCAN2 program | Text format (.text) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.24906378.v1 [26] |
Data file 10 | Genes encoding Cazymes | Spreadsheet (.xlsx) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213570 [27] |
Data file 11 | Genome comparison of A. porri Apn Nashik with other Alternaria species | Microsoft word (.doc) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213636 [28] |
Data file 12 | Clusters of orthologous genes shared and unique among the Alternaria spp | Microsoft word (.doc) | https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26213702 [29] |
Data set 3 | Sequencing reads of A. porri genomic DNA | Fastq file (.fq.gz) | NCBI SRA ID: SRX26191501 |
Data set 4 | Genomic assembly of A. porri | Fasta file | NCBI Genbank database: JAPZQB000000000.1 |